CDS

Accession Number TCMCG015C17210
gbkey CDS
Protein Id XP_027109389.1
Location complement(join(58862143..58862941,58864836..58865932,58866240..58867255,58867397..58868378,58869084..58869258,58869904..58870001,58874712..58874806,58874864..58874978))
Gene LOC113729271
GeneID 113729271
Organism Coffea arabica

Protein

Length 1458aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA506972
db_source XM_027253588.1
Definition mediator of RNA polymerase II transcription subunit 14-like [Coffea arabica]

EGGNOG-MAPPER Annotation

COG_category K
Description mediator of RNA polymerase II transcription subunit
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
KEGG_ko ko:K15156        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04919        [VIEW IN KEGG]
map04919        [VIEW IN KEGG]
GOs GO:0000428        [VIEW IN EMBL-EBI]
GO:0002376        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005667        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0006955        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008284        [VIEW IN EMBL-EBI]
GO:0009266        [VIEW IN EMBL-EBI]
GO:0009409        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009627        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009631        [VIEW IN EMBL-EBI]
GO:0009814        [VIEW IN EMBL-EBI]
GO:0016591        [VIEW IN EMBL-EBI]
GO:0016592        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0030880        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0042127        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044798        [VIEW IN EMBL-EBI]
GO:0045087        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0055029        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070847        [VIEW IN EMBL-EBI]
GO:0090575        [VIEW IN EMBL-EBI]
GO:0098542        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGGAAGGAGCGTTTTCCAGTCCAAAGGTGCAATAAACTCCTTCCAAGGGGCAATGGTCCATTTCAAGTGATGGAACGAAGTAATGACAATGCTTACAAACTTGATCTCCCAGATGACGAGCTTGATTTGGGGACAAATCGCCTTCAAGAGGAGGGGAATGATAAAGGGGCACAAGTGATCAAGGGTGACCAAGTTACAAATGATCCAGACATATCTAAATTTGATTCCAGGAAGGATGAAGGGCAGGAAGTTCTGTTGGTCCGTGCCTACGGCTTATCGTTTTTCACTCTTGGAATAAATTTAAGGAATGGCCGCTTCCTTCTTCACTCATCTAAGAATACTGTCTCACCATCTGAACTTTTGGAGTGTGAAGAAGCTCTAAACCAAAGAACTATGACTGCTGCACAAGTTTTTATGAGCTTGAGAAGCAAAAGCATTTCACACTTGTTTGCATGTGTTGGAAGGTCCTTGGGCCTGGAGGTCTTTGAACGTGGTTTTGCATCGTTGAAGTTACCTAAGAATATTTCAAATGGTTCAAGTGTGTTGCTGATGAGTTTTCCAGAGTGTGGGAGTTATTATTTGCTGATGCAACTTGAGAAGGATTTCAAACCGCTGTTTAACTTAATAGAAACTCAGCCAGATCCTTCAGGGAAAGCTGAATCTTTTAGCGACTTGAATAATATCATTCGTGTAAAAGATGTTGATATTGGTCAGATGCAGATGTGTGAAGATGACCTCAATCTAAGCCTCCTTGACTGTGGAAAATTACTATCTGTTTTACCTAGTCTCAGTCCTAACCGGACTTCTGAACAAAGTCTTCTTTCTGAATTCACCTTGGAGGGATCTGCACTTGCCTCTAGCTTTCCCTCAAAGTTTTCATCAATTGTGGATGAAATATTTGAGCTGGAGAAAGGGTCATCTGCCGCCAATCTCTCTGGTCAGGGCCCAAGTCTGGGTTCAACATATGGTACTTCTCCTGCATCTCATTTTGGTGCTGGAGGCATGAATCTCCATTCTACAAAAGTTGGAACGCCATCTCCTAAGTGGGATGGTGGTTCACAGGTACCGACCAGATTGTCTGGTATGCCACCTAGTTATAGTGGTTCCATCTACACTGGGAGCCATTATAGGGGCTTGATACAGTCAGGTTCTACTGGTTCCATTTCCGTTGGCCCTGGAAGAAGTCAGGTGAAGAACTTATCCTCCTCAAAGTCTGATCAAGATTTGACCTCTCTGAGGTCTCCACAGTCTGGTGGACTTGGGTCTTACTCATTGATCGATGAACATCAGATAACAACTCCCGGAATTCGTACAGCTGGACATTTGTCTCCCTCTCCTCAACTTGGCCTTCCTGCTTCTGGAGCAAGTGCAAAACCTATTGGAGCTAGAAATTCATCCGGCAATGCTATACCTGGAAATCTTAGAGTTTCTGGATTTAATTCATTGGTTGCGTCACCCGTATCTCAAACACCAGATTCCAATTGTATGAATTCAAATCTTGATACTGTTCCACGACAAGAGAAAATGTCAAGAAAGCGTACGCTGACAGATTTGTTGAGCTCTCTCCCATCACTTCAACATCTAGAGGCTAATGACAAATCTTACAAGAGAAGGAGAATAGTGGAATGGAGACCTCAACAACTTACTTCACAGATGCTCATTACCTCAGAACTTTTTCGAAAAACTGAGGGATACAGTTATGGAGATCTTATATCTGAAGCAAATAAGGGTAATTTACCCTCTAGTATATATGTTTCTGCTCTGCTTCACGTGGTCAGACACTGCTCACTTTGTATTAAGCATGCCCGACTAACCAGTCAGATGGACGCACTTGAAATTCCATATGTTGAAGAAGTGGGTCTAAGAAGTGCATCCTCAAACTTGTGGTTTCGTCTTCCATTTGCAAGAGGTGATACATGGCAGCATATATGCTTACGATTGGGGAGACCTGGAAGTATGTATTGGGATGTGAAAATTTGTGATCAACACTTCGGGGACTTGTGGGAACTTCAGAAAGGAATGAGTAATTCTCCATGGGGTCCTGGTGTTCGTATTGCTAATACATCTGATGTTGATGCTCATATTCGGTATGATGCTGAAGGTGTTGTTTTGAGTTACCATTCTGTTGAGGCTGATAGTATTAGGAAACTAGTAGCCGATATCGAAAGGCTTTCTAATGCTAGAACCTTTGCCCTTGGAATGCGAAGTCTACTTGGAGTACGGACAGATGAGAAATTTGAAGAAAATGCTACTGCCTCTGATGTTAAAGCACCAGGTGGTGTGAAAACTGTACTAGACATGGCTGACAAATTTTCTGAACAGATGAGGAGGGCATTTAAAATTGAAGCTGTTGGACTCATGAGTTTATGGTTCAGTTTTGGATCTGGAGTACTTGCTCGCTTTGTTGTTGAATGGGAATCAGGCAAAGAGGGCTGCACAATGCATGTTTCTCCTGACCAACTTTGGCCCCACACCAAGTTTTTGGAAGATTTCATCAATGGTGCTGAAGTTGCATCACTTTTGGATTGTATACGACTGACTGCTGGACCCTTACAGGCTCTTGCTGCTGCCACACGTCCTGCACGAGCTGCTCCTGTTTCAGGAGTTTCTGGTGTTGCAGCACCTATCTCCTCTATGTCAAGACAGAGTGGATATGTTCCGTCTCAGGGTCAGCTGCCAAGCATTGCAACACCCAATGCTAGTCAGGCTGCATCTGTTCCCGCAGGAAATGCTTCTGCCTCTGTAACTTCAGGTCCTCTTGCTTCTCAAAATCCTCATACTACTGCAATGTTGGCAGCTGCAGCTGCCGCTGCCGCTGGGAGAGGTGGTCCTGGCATTGTTCCTAGTTCATTGTTGCCAATTGATGTCTCTGTAGTACTCCGTGGTCCCTACTGGATACGGATTATATATCGGAAAAATTTTGCTGTTGACATGCGATGTTTTGCCGGAGATCAGGTTTGGTTGCAACCTGCAACGCCACCCAAAGGGGGACCGTCTGTTGGAGGATCACTTCCATGTCCACAATTCCGGCCCTTTATAATGGAGCATGTTGCTCAGGAATTGAATGGCATAGATTCCAGTTTTGCTGGTGGTCAACAAACAGTTGTTCTAGCCAATGGTAGTAGTTCAAATCCAAGTACAGTTTCACAGCTTTCAGCCTCCAATGGAAACAGAACCAATCTCGCAAATTCTGCTGGAATATCTCGGTCAGCAAATGCTGTTTCTGGTCTAAATCGCATGGGAAATGCTGTTCCTGCCGGATCAAATTTAGCTGCAGCAAACTCTGGGTTGCCATTACGCAGATCTCCTGGCACAGGTGTACCTGCTCATGTAAGAGGCGAACTGAATACAGCCATTATTGGGCTTGGGGATGATGGAGGTTATGGGGGTGGATGGGTCCCTCTTGTTGCCCTCAAGAAGGTTCTTCGAGGTATTCTCAAATATCTGGGAGTGTTGTGGCTATTTGCACAGTTACCAGAGCTTTTGAAAGAGATCCTCGGTTCAATCCTAAAGGATAATGAAGGTGCACTTTTGAATTTGGATCAGGAGCAACCAGCATTACGCTTCTTTATCGGGGGTTATGTTTTTGCTGTTAGTGTACACAGGGTTCAACTTCTTCTCCAAGTTATTAGTGTAACTAGATTTCACCATTCCCAGCGGCAGCAGCAGAATTCAGCAACTGCTCAGGATGAATTGACTCCGTCTGAAATAAGTGAAATATGCGATTACTTTAGTCGTCGCGTTGCATCGGAGCCCTATGATGCTTCTCGTGTTGCTTCATTCATTACGCTATTAACTCTACCAATTTCGGTTTTAAGAGAATTTTTGAAACTCATTGCGTGGAAGAAAGGCTTAGCTCCATCTCCAGGTGGAGATTTGGCTCCTGCTCAAAAATCCCGCATTGAACTTTGTCTTGAGAATCATGCAGGCTTTACTATGGATGGAAAAAATGAAAGTTCCTCTGTATCTAAAAGCAATATTCACTATGATCGAGCACATAATGCTGTTGATTTTGCACTGACTGTTGTTCTTGATCCTGCTCACATACCACATATAAATGCTGCTGGTGGTGCTGCTTGGCTTCCTTATTGTGTTTCTGTGAGATTGAGATACTCATTTGGTGATAATCCTAATGTATCTTTCCTGGGGATGGAGGGAAGCCATGGAGGTCGGGCATGCTGGCTGAGAGTTGATGAGTGGGAAAAATGTAAGCAGCGGGTAACCCGCACTATGGACGTGAATGGATCTTCAGCCGGAGATGGTAATCAGGGAAGATTGAGAGTTGTTGCCGATAGTGTACAAAGAACATTGCATGGTTGCCTTCAAGGTCTGAGAGAGGGCAGCGGTGGTGCTGGCACCATTGGAACAACATGA
Protein:  
MRKERFPVQRCNKLLPRGNGPFQVMERSNDNAYKLDLPDDELDLGTNRLQEEGNDKGAQVIKGDQVTNDPDISKFDSRKDEGQEVLLVRAYGLSFFTLGINLRNGRFLLHSSKNTVSPSELLECEEALNQRTMTAAQVFMSLRSKSISHLFACVGRSLGLEVFERGFASLKLPKNISNGSSVLLMSFPECGSYYLLMQLEKDFKPLFNLIETQPDPSGKAESFSDLNNIIRVKDVDIGQMQMCEDDLNLSLLDCGKLLSVLPSLSPNRTSEQSLLSEFTLEGSALASSFPSKFSSIVDEIFELEKGSSAANLSGQGPSLGSTYGTSPASHFGAGGMNLHSTKVGTPSPKWDGGSQVPTRLSGMPPSYSGSIYTGSHYRGLIQSGSTGSISVGPGRSQVKNLSSSKSDQDLTSLRSPQSGGLGSYSLIDEHQITTPGIRTAGHLSPSPQLGLPASGASAKPIGARNSSGNAIPGNLRVSGFNSLVASPVSQTPDSNCMNSNLDTVPRQEKMSRKRTLTDLLSSLPSLQHLEANDKSYKRRRIVEWRPQQLTSQMLITSELFRKTEGYSYGDLISEANKGNLPSSIYVSALLHVVRHCSLCIKHARLTSQMDALEIPYVEEVGLRSASSNLWFRLPFARGDTWQHICLRLGRPGSMYWDVKICDQHFGDLWELQKGMSNSPWGPGVRIANTSDVDAHIRYDAEGVVLSYHSVEADSIRKLVADIERLSNARTFALGMRSLLGVRTDEKFEENATASDVKAPGGVKTVLDMADKFSEQMRRAFKIEAVGLMSLWFSFGSGVLARFVVEWESGKEGCTMHVSPDQLWPHTKFLEDFINGAEVASLLDCIRLTAGPLQALAAATRPARAAPVSGVSGVAAPISSMSRQSGYVPSQGQLPSIATPNASQAASVPAGNASASVTSGPLASQNPHTTAMLAAAAAAAAGRGGPGIVPSSLLPIDVSVVLRGPYWIRIIYRKNFAVDMRCFAGDQVWLQPATPPKGGPSVGGSLPCPQFRPFIMEHVAQELNGIDSSFAGGQQTVVLANGSSSNPSTVSQLSASNGNRTNLANSAGISRSANAVSGLNRMGNAVPAGSNLAAANSGLPLRRSPGTGVPAHVRGELNTAIIGLGDDGGYGGGWVPLVALKKVLRGILKYLGVLWLFAQLPELLKEILGSILKDNEGALLNLDQEQPALRFFIGGYVFAVSVHRVQLLLQVISVTRFHHSQRQQQNSATAQDELTPSEISEICDYFSRRVASEPYDASRVASFITLLTLPISVLREFLKLIAWKKGLAPSPGGDLAPAQKSRIELCLENHAGFTMDGKNESSSVSKSNIHYDRAHNAVDFALTVVLDPAHIPHINAAGGAAWLPYCVSVRLRYSFGDNPNVSFLGMEGSHGGRACWLRVDEWEKCKQRVTRTMDVNGSSAGDGNQGRLRVVADSVQRTLHGCLQGLREGSGGAGTIGTT